PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0043s0218.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 341aa    MW: 36075.8 Da    PI: 8.4467
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0043s0218.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.91.4e-19129178255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                          +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa+a++ a++ ++g
  Kaladp0043s0218.1.p 129 RYRGVRQRP-WGKWAAEIRDPY----KaTRVWLGTFDTAEAAARAYDVAALGFRG 178
                          7********.**********76....35**********************98887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103225.515129186IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-22129187IPR016177DNA-binding domain
SMARTSM003801.6E-36129192IPR001471AP2/ERF domain
PfamPF008471.1E-12129178IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-32129187IPR001471AP2/ERF domain
PRINTSPR003675.3E-12130141IPR001471AP2/ERF domain
CDDcd000182.49E-16137188No hitNo description
PRINTSPR003675.3E-12152168IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006970Biological Processresponse to osmotic stress
GO:0009749Biological Processresponse to glucose
GO:0009788Biological Processnegative regulation of abscisic acid-activated signaling pathway
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MNREAEALSN WGAFMGFDRE QEMSAMVNAL TNVVSGHGGS TSGFDSYLAS SSPPLGGLKR  60
GRQDDAVTVT GACRAQDELI YATGTSSVMS LSHAMTEALS SGPAEPTLVP TYVHADVNQG  120
FVGEGERRRY RGVRQRPWGK WAAEIRDPYK ATRVWLGTFD TAEAAARAYD VAALGFRGNK  180
AKLNFPENVS LRPPPQLASP AAQMTFSGGQ SSLLNIGGMQ SHGLQYTLLS GSSYSNLGSS  240
SAPHQHVHGY QSLAASAALD QQLNQMVPRF QSQTMSLLEQ RMLASSMPFQ SSPSSSASSS  300
WQSSSSSPPL SHHSQATART GLDGGARQSQ NSGNNNPSPP *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-21130190667ATERF1
3gcc_A7e-21130190667ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00584DAPTransfer from AT5G64750Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014631268.12e-43PREDICTED: ethylene-responsive transcription factor ABR1-like
SwissprotQ9FGF82e-32ABR1_ARATH; Ethylene-responsive transcription factor ABR1
TrEMBLA0A0B2RP722e-43A0A0B2RP72_GLYSO; Ethylene-responsive transcription factor ERF114
TrEMBLA0A0R0JXR92e-43A0A0R0JXR9_SOYBN; Uncharacterized protein
STRINGGLYMA05G32040.15e-43(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64750.15e-24ERF family protein